Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015901845.1_cds_XP_016451891.1_46188
CDS Infomation

[gene=LOC107776500] [db_xref=GeneID:107776500] [protein=brefeldin A-inhibited guanine nucleotide-exchange protein 1-like] [frame=3] [partial=5'] [protein_id=XP_016451891.1] [location=complement(join(87912..88523,91048..91727,92137..92497,92855..93176,93272..93774,94565..94838,95189..95478,99531..99953,100063..>100415))] [gbkey=CDS]
Sequence

TTAATTCCATCAGATATTTGCAGGACTGTTAATGGTCTTCTTAAAACTGCTCTTGGTCCA
CCTCCTGGTTCCACTACTACATTGTCTCCAGTCCAAGATATTACATTTCGTTCTGAATCG
GTGAAATGCTTAGTTACAATTATAAAGTCAATGGGGACGTGGATGGACCAACAACTGAAG
GTAGGGGACCCCAATCTAGATAAGGTGTCTGATCATGAAGTGCCAGAAGCCGCTACCAGT
GTTAGTGAAGAGGGAAATATTATTGACTACGAGCTGCATCCGGAAGCAAATTCTGAATTT
TCTGGTGCTGCTGCCTTGGAGCAGCGCCGTGCTTATAAATTAGAAATACAGAAAGGTGTT
TCCCTGTTCAACAGAAAGCCTTCAAAGGGGATTGATTTTTTAATGAGCACCAAAAAGCTT
GGCAATTCCGCAGAAGATGTAGCCTCTTTTCTGAAGAACACGACCGGATTAAATCCATCC
ATTATTGGTGATTATTTGGGTGAAAGAGAGGAGTTTCCTCTGAAAGTTATGCATGCATAT
GTCGATTCTTTTAATTTTGAAGGTATGGACTTTGGTGAATCAATCAGATATTTCCTTAGA
GGGTTCAGATTACCTGGTGAAGCTCAGAAGATTGACCGTATAATGGAGAAGTTTGCAGAG
CGCTATTGTAAATGCAACCCAAACTCTTTTACCAGTGCAGAAACAGCTTATGTGCTTGCT
TACTCTGTGATAATGCTCAATACAGATGCACATAATAGCATGGTGAAAGATAAGATGACA
AAAGCTGATTTCATCCGGAACAATCGAGGGATTGACGATGGGAAGGACTTACCTGAAGAT
TATTTGGGTGCTCTCTATGACCAAATTGTGAAAAATGAGATAAAGATGAATGCAGATTCT
TCTGTGCCGCAAAACAAGCAGGGTAACAGTCTTAATAAGCTTTTGGGTTTGGATGGTATA
CTGAATCTAGTATGGAAACAGAGAGAAGAAAAACCACTGGGTGCCAATGGGGTTCTTGTG
AGGCATATTCAAGAGCAGTTTAAAACAAAATCTGGAAAATCGGAGTCTATCTATTATGTC
ATTGCAGATCCAGCTATATTGAGATTTATGGTAGAAGTCTGCTGGGGTCCCATGCTTGCT
GCTTTCAGTGTCACCCTAGACCAGAGTGATGATAAGAATGCCACTTCTCAATGTTTGCTG
GGGTTCAGGCATGCTGTGCACATTACAGCTGTGATGGGTATGCAGACGCAGAGAGATGCT
TTTGTCACATCTATGGCAAAGTTCACTTATCTTCATTGTGCTGCAGATATGAAACAAAAA
AATGTTGATGCAATGAAAACAATAATGTCGATTGCCATTGAAGATGGGAGTCATCTTCAT
GAAGCTTGGGAGCATTTTTTGACGTGTCTATCTCGATTTGAGCATCTGCAGCTGCTGGGG
GAGGGTGCACCATCTGATTCCTCTTTTTTTACTACCTCGAACTCTGAATCTGAGGAAAAG
ACATTGAAGTCAGCTGGATTTCCATCACTGAAGAAAAAAGGGACACTCCAAAATCCAACT
GTTGCTGCTGTTGTTCGAGGGGGTTCATATGACAGCGCAACTGTTGGAGCTAACTCTCCA
GTATTGGTGACTCCAGAACAGATAAATAACTTCATTTCAAACTTAAACTTACTTGATCAG
ATCGGCAACTTTGAACTAAATCACATATTTGCTCATAGCCAAAGGCTGAACAGTGAAGCA
ATAGTTGCTTTTGTCAAGGCCCTTTGCAAAGTTTCGATGTCAGAACTACAGTCTCCAACA
GATCCCCGTGTATTTAGCCTTACAAAAATTGTTGAAGTTGCGCACTATAACATGAACCGT
ATCAGATTAGTGTGGTCCCACATATGGAGTGTTCTTTCAGAGTTCTTTGTGGCTGTTGGT
TTGTCAGAAAATCTTTCAGTTGCAATTTTTGTCATGGATTCATTGCGACAACTTGCTATG
AAATTTTTAGAACGAGAGGAACTGGCGAATTACAACTTTCAGAATGAATTTTTGAGACCA
TTTGTTATTGTTATGCAGAAAAGTAATTCTGCTGAAATCAGGGAGTTGATAGTTCGTTGT
ATTTCCCAAATGGTTCTGAGTCGTGTCAATAATGTAAAATCTGGGTGGAAGAGTGTTTTT
ATGGTTTTTACAGCTGCTGCTGCAGATGAAAGGAAGAATATTGTGTTGCTGGCCTTTGAA
ACCATGGAAAAGATTGTACGGGAATATTTTCGTTATATTACTGAGACTGAAACATTGACT
TTTACTGATTGTGTTAGATGCCTCATCACCTTCACAAACAGCAGATTCAACAGTGATGTT
AGCCTCAATGCTATTGCTTTTCTCCGTTTCTGTGCTGTTAAACTTGCAGAAGGGGGCCTT
GTTAGCAACGAGAAAAACAACAATAATGATTCATCTATTCCAGTGGCCGAAGATGAGGCT
TCAGATGGGATGTTCTTCACAGATAAAGATGATTATATGTCTTTCTGGGAGCCTCTGCTC
ACAGGGTTATCAAGATTGACTTCAGATCCCCGATCAGCTATCAGAAAGAGTGCATTGGAA
GTTCTTTTCAATATCTTGAAGGACCATGGCCATCTCTTTCCACACCTATTCTGGATTAAT
GTCTTCAAGTCTGTAATCTACCCAATATTCAGTCCAGTAAACGATAGCACAGAAGCTCAA
GTGAAGTATGACCAGTCTTCATTTAAATCCAGATATATACCACTGGATGGATGCTTATGG
GACTCTGAAACTTCTGTGGCGGCAGCTCAATGTTTGGTGGATCTATTTGTTAATTTCTTT
GGTATGGTGAGGTCTGAATTGCCAAGTGTAGTGTCTATAATGGTAGGATTTATAAAAGGT
TCTGGCAAGGATCCTGCAACCACTGGGGTAGCTTCTTTAATGCGTTTGGCAGGTGATTTG
GGAGGCAAATTTCGTGAAGAGGACTGGAAAGTTATCTTTCTAGCTCTGAAAGAAGCTTCA
AATTCCACTCTACCCAATTTTCCTAAGCTTTTGAGAACAATGGACGGCATTGAGATACCC
ATTAGTCAGTCCGATAATGATATGGAGTTTTCTTCTGGGGCTGGATTAATAAATGACGAA
TCAGAGGATGACAACCTGCATACTGCACGATATGTTGTTTCAAGAATGAAGGATCATATA
GCGGCTCAGTTGCGCATCATACAGGTGTCGTCTGATCTCTACAAGATGTGTCGGCGATCA
GTATCAGCTGATACTATCAATATCCTCCTTGGTATTTATTCATCTGTTACTTCTCATGCC
CAGCAATTGAAATCCGAGAAAGGTGTACAAGTGAAGCTGCAAAAAGCATGCTCTATCCTT
GAGATACCAGAACCTCCGCTGGTGTATTTTGAAAATGAGTCCTACCAGAATTACCTCAAC
TTCTTGCATGGGCTGCTTGTTAACAATTCATCATTGGTTGAAAAGAGAAATATAGAAACG
GAACTTGTGGGTGTATGTGAAGAAATTCTACGCGTATACTTGGACTGTGCTGGATTGAAC
TCTGTCAAGAGGAAACCAGATGATAAGGCAACATACCTGTGGAATCTTCCTTTGGGTTCA
GCTAAGAAGGAAGAGCTAGTAGCAAGGACTCCCTTGGTTCTATCAGTATTACGCATTCTG
TGCAGTTGGCAAAGCGATTCTTTTAGGAGATACATTTCTCAGTTGTTCCCGTTAATGGTA
GATCTTGTTCGGAGTGAGCATAGCTCAGGAGAAGTTCAGCGTGAGCTCAGTCATTTTTTT
CAATCCTGTATTGGCCCCATTATTATGAAATTGTGA

Peptide Sequence

PEP ID

XP_016451891.1
PEP Infomation

PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1-like, partial [Nicotiana tabacum]
Sequence

LIPSDICRTVNGLLKTALGPPPGSTTTLSPVQDITFRSESVKCLVTIIKSMGTWMDQQLK
VGDPNLDKVSDHEVPEAATSVSEEGNIIDYELHPEANSEFSGAAALEQRRAYKLEIQKGV
SLFNRKPSKGIDFLMSTKKLGNSAEDVASFLKNTTGLNPSIIGDYLGEREEFPLKVMHAY
VDSFNFEGMDFGESIRYFLRGFRLPGEAQKIDRIMEKFAERYCKCNPNSFTSAETAYVLA
YSVIMLNTDAHNSMVKDKMTKADFIRNNRGIDDGKDLPEDYLGALYDQIVKNEIKMNADS
SVPQNKQGNSLNKLLGLDGILNLVWKQREEKPLGANGVLVRHIQEQFKTKSGKSESIYYV
IADPAILRFMVEVCWGPMLAAFSVTLDQSDDKNATSQCLLGFRHAVHITAVMGMQTQRDA
FVTSMAKFTYLHCAADMKQKNVDAMKTIMSIAIEDGSHLHEAWEHFLTCLSRFEHLQLLG
EGAPSDSSFFTTSNSESEEKTLKSAGFPSLKKKGTLQNPTVAAVVRGGSYDSATVGANSP
VLVTPEQINNFISNLNLLDQIGNFELNHIFAHSQRLNSEAIVAFVKALCKVSMSELQSPT
DPRVFSLTKIVEVAHYNMNRIRLVWSHIWSVLSEFFVAVGLSENLSVAIFVMDSLRQLAM
KFLEREELANYNFQNEFLRPFVIVMQKSNSAEIRELIVRCISQMVLSRVNNVKSGWKSVF
MVFTAAAADERKNIVLLAFETMEKIVREYFRYITETETLTFTDCVRCLITFTNSRFNSDV
SLNAIAFLRFCAVKLAEGGLVSNEKNNNNDSSIPVAEDEASDGMFFTDKDDYMSFWEPLL
TGLSRLTSDPRSAIRKSALEVLFNILKDHGHLFPHLFWINVFKSVIYPIFSPVNDSTEAQ
VKYDQSSFKSRYIPLDGCLWDSETSVAAAQCLVDLFVNFFGMVRSELPSVVSIMVGFIKG
SGKDPATTGVASLMRLAGDLGGKFREEDWKVIFLALKEASNSTLPNFPKLLRTMDGIEIP
ISQSDNDMEFSSGAGLINDESEDDNLHTARYVVSRMKDHIAAQLRIIQVSSDLYKMCRRS
VSADTINILLGIYSSVTSHAQQLKSEKGVQVKLQKACSILEIPEPPLVYFENESYQNYLN
FLHGLLVNNSSLVEKRNIETELVGVCEEILRVYLDCAGLNSVKRKPDDKATYLWNLPLGS
AKKEELVARTPLVLSVLRILCSWQSDSFRRYISQLFPLMVDLVRSEHSSGEVQRELSHFF
QSCIGPIIMKL

Transcript Sequence

Gene sequence data has not been registered.